BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A08LP1|AL428147
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig423 1872 0.0
>3x_Contig423
Length = 2127
Score = 1872 bits (938), Expect = 0.0
Identities = 957/969 (98%), Gaps = 1/969 (0%)
Strand = Plus / Plus
Query: 1 gatcatgagaaaagatgctatcgaacaagatttgacgcaacaaagaacagagaaagagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gatcatgagaaaagatgctatcgaacaagatttgacgcaacaaagaacagagaaagagta 164
Query: 61 cctcgacgacgtatcgttggaaattgaattgatagacgaggatgagaaggtacaatataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cctcgacgacgtatcgttggaaattgaattgatagacgaggatgagaaggtacaatataa 224
Query: 121 gatcggagacgtcttcgtatttctaaaacagaaagaagtagttgaaaagttagaatccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gatcggagacgtcttcgtatttctaaaacagaaagaagtagttgaaaagttagaatccga 284
Query: 181 tgctgaaaacatcgacagcwatatagaaaagctagagagcgatgaggcggaattggactc 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tgctgaaaacatcgacagcaatatagaaaagctagagagcgatgaggcggaattggactc 344
Query: 241 aagaataaaagagctaaagagtatattgtatgccaaattcggtgacaacatcaatttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aagaataaaagagctaaagagtatattgtatgccaaattcggtgacaacatcaatttgga 404
Query: 301 acgttgagcccataaatatacattgctgaagtgcttgatagaattgaaaawatatcctta 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 405 acgttgagcccataaatatacattgctgaagtgcttgatagaattgaaaaaatatcctta 464
Query: 361 aaccgagtwatatatgtttgcgtataanatctacatagaaaatwatagtaaagaccgaca 420
|||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 465 aaccgagtaatatatgtttgcgtataaaatctacatagaaaataatagtaaagaccgaca 524
Query: 421 caacgttgattcagtccataatgcaatcaaacagcatgttctttcagcccacctaacgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caacgttgattcagtccataatgcaatcaaacagcatgttctttcagcccacctaacgca 584
Query: 481 tgawcctcctggtcttcttctatttcaagcccccaattaadatgttggttcatttccttg 540
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 585 tgaacctcctggtcttcttctatttcaagcccccaattaaaatgttggttcatttccttg 644
Query: 541 aatttwgcgacaaactcttctggcaaatccaaactaaacccattgaataatgtatattca 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aatttagcgacaaactcttctggcaaatccaaactaaacccattgaataatgtatattca 704
Query: 601 tgcgttatagtcccatcaagttcatgtgccacattcactaaatcattgtagtattggdag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 705 tgcgttatagtcccatcaagttcatgtgccacattcactaaatcattgtagtattggaag 764
Query: 661 ctgtcaggatatatdaccataagtgaagatactgtatttgacgatgacgatgatgatgtt 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ctgtcaggatatataaccataagtgaagatactgtatttgacgatgacgatgatgatgtt 824
Query: 721 agtaaagttgagaattaaagggaaaaaaaagggttaagaaaatccgtccttaaacataca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 agtaaagttgagaattaaagggaaaaaaaagggttaagaaaatccgtccttaaacataca 884
Query: 781 cgaactggccaacgcc-gttccaataaaaataggtgcaaatctcatatctgcggctaatg 839
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 cgaactggccaacgccggttccaataaaaataggtgcaaatctcatatctgcggctaatg 944
Query: 840 ctttgttattactgttgctactctattctttgttcttgctaacaatctcccttatccttc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 ctttgttattactgttgctactctattctttgttcttgctaacaatctcccttatccttc 1004
Query: 900 atatatcatgattcattattcttttatatggatatmatatctcatagtgagtatttggca 959
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1005 atatatcatgattcattattcttttatatggatatcatatctcatagtgagtatttggca 1064
Query: 960 gaaggaaaa 968
|||||||||
Sbjct: 1065 gaaggaaaa 1073
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7704
Number of Sequences: 1807
Number of extensions: 7704
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)